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-- Jason M. Swails Quantum Theory Project, University of Florida Ph.D. Candidate 352-392-4032 On Apr 25, 2012, at 8:23 PM, Shulin Zhuang <shulin.zhuang.gmail.com> wrote: > Dear David Case, > > Following your suggestions ,I got the same information using gcc -v and > gfortran --v : > > Using built-in specs. > Target: x86_64-redhat-linux > Configured with: ../configure --prefix=/usr --mandir=/usr/share/man > --infodir=/usr/share/info --enable-shared --enable-threads=posix > --enable-checking=release --with-system-zlib --enable-__cxa_atexit > --disable-libunwind-exceptions --enable-libgcj-multifile > --enable-languages=c,c++,objc,obj-c++,java,fortran,ada > --enable-java-awt=gtk --disable-dssi --enable-plugin > --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic > --host=x86_64-redhat-linux > Thread model: posix > gcc version 4.1.2 20080704 (Red Hat 4.1.2-46) > > > I re-configured it using the -nofftw3 and can successfully installed the > serial and parallel version of amber 12. > > Best regards > Shulin > > On Wed, Apr 25, 2012 at 8:12 PM, David A Case <case.biomaps.rutgers.edu>wrote: > >> On Wed, Apr 25, 2012, Shulin Zhuang wrote: >> >>> I use gfortran. >> >> It would still be very helpful if you could type "gfortran --v" and >> "gcc -v" and report what the result is. >> >>> >>> step 1: ./configure gnu this step is ok >>> >>> step 2:make install During this step lots of warning and >> error. >>> I just select several warnings and errors: >> >> Warnings are not important. >> >>> gfortran -DFFTW -DBINTRAJ *-c -O3 -ffree-form >>> *-I/home/hjkx/program/amber12//include >>> -I/home/hjkx/program/amber12//include *-o fftw3.o fftw3.F90* >>> >>> error： sententce (1) not defined in file fftw3.f03:1732 >>> >>> included in * fftw3.F90*：10 >>> >>> type(C_PTR), value :: output_file >> >> I suspect that your compiler does not support the ISO_C interface, but that >> somehow the configuration script thought that it did. This is why we >> need version numbers. It is also required that gcc and gfortran use the >> same >> version of the compilers. >> >> A workaround (depending on your needs) is to re-configure using the >> -nofftw3 >> flag. >> >> ...dac >> >> >> _______________________________________________ >> AMBER mailing list >> AMBER.ambermd.org >> http://lists.ambermd.org/mailman/listinfo/amber >> > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amberReceived on Wed Apr 25 2012 - 18:00:05 PDT