Re: [AMBER] the command to make the sander running visible

From: Fredrick Devadoss <Fredrick.Devadoss.uni-konstanz.de>
Date: Sun, 08 Apr 2012 16:27:27 +0200

Hi Acoot,

You can see the information in the mdinfo file.

Cheers
Fredrick.
On Sunday, April 8, 2012 15:10 CEST, Acoot Brett <acootbrett.yahoo.com> wrote:
 
> Dear All,
>  
> I have tried to use tail, but it does not work
>  
> I use the following command, is anything wrong?
>  "$AMBERHOME/exe/sander -O -i polyAT_vac_md1_12Acut.in -o polyAT_vac_md1_12Acut.out -c polyAT_vac_init_min.rst -p polyAT_vac.prmtop -r polyAT_vac_md1_12Acut.rst -x polyAT_vac_md1_12Acut.mdcrd tail -f polyAT_vac_md1_12Acut.out"
>  
> It says tail cannot be recognized.
>  
> I am looking forward to getting your reply on how to solve the problem.
>  
> Cheers,
>  
> Acoot
>
> ----- Original Message -----
> From: Acoot Brett <acootbrett.yahoo.com>
> To: AMBER Mailing List <amber.ambermd.org>
> Cc: Sent: Sunday, 8 April 2012 10:13 PM
> Subject: [AMBER] the command to make the sander running visible
>
> Dear All,
>  
> As for the sander MD step usually takes a long time, it makes the computer looks like dead.
>  
> Will you please tell me the sander command to show the sander MD process is on going, especially the sander command which indicates how much time left to complete the on-going sander step?
>  
> Cheers,
>  
> Acoot
>
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Received on Sun Apr 08 2012 - 07:30:03 PDT
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