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-- Jason M. Swails Quantum Theory Project, University of Florida Ph.D. Candidate 352-392-4032 On Mar 29, 2012, at 1:01 AM, vishal Nemaysh <vishal.bioinfotech.gmail.com> wrote: > Respected Sir, > > As per your suggestion i can download the AmberTools 1.5 bug fixes and > install it too. > but i am unable to form AMBERHOME directory while other files were formed > then i transfered those files in separately created home directory > 'AMBERHOME' and then i gave following command "cd $AMBERHOME > patch -p0 -N < bugfix.all" followed by rest process but still unable to > excute the programme. > so kindly provide me the suggestion to installa Amber 11, AmberTools 1.5 > and AmberTools 1.5 bug fixes. > > Thanking You, > > Your Sincerely, > > Vishal > > > On Thu, Mar 22, 2012 at 6:39 PM, Jason Swails <jason.swails.gmail.com>wrote: > >> Another comment -- AmberTools 1.5 and Amber 11 tarballs both extract into >> an amber11/ directory. This is expected (and, in fact, essential). >> >> Don't forget to download the Amber11 and AmberTools 1.5 bug fixes, either: >> http://ambermd.org/bugfixes.html >> >> HTH, >> Jason >> >> On Thu, Mar 22, 2012 at 8:18 AM, David A Case <case.biomaps.rutgers.edu >>> wrote: >> >>> On Thu, Mar 22, 2012, vishal Nemaysh wrote: >>>> >>>> I am a newbie to Amber mailing list.I am trying to install Amber on >>>> 64 bit machine having Fedora 6 OS. While untaring the Amber11.tar file >>>> I am not able to find Amber Tools file. Both the files are named >>>> amber11. >>> >>> I think we need more details. Did you download the file >>> "AmberTools1.5.tar.bz2" from the Amber web site? It's not clear what you >>> mean >>> when you say that you can't find it. If you are having trouble at this >>> level >>> (untarring the files) you need to post *exactly* what you did: don't use >>> inexact phrases like "both the files". Don't leave out anything. >>> >>> ...regards....dac >>> >>> >>> _______________________________________________ >>> AMBER mailing list >>> AMBER.ambermd.org >>> http://lists.ambermd.org/mailman/listinfo/amber >>> >> >> >> >> -- >> Jason M. Swails >> Quantum Theory Project, >> University of Florida >> Ph.D. Candidate >> 352-392-4032 >> _______________________________________________ >> AMBER mailing list >> AMBER.ambermd.org >> http://lists.ambermd.org/mailman/listinfo/amber >> > > > > -- > Vishal > Research Scholar, > University of Delhi, > North Campus > Delhi-110007 > M: 91+9650736653 > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amberReceived on Thu Mar 29 2012 - 05:00:03 PDT