Dear Sir
Yes, there is no such directory of file bin/xaLeap.
when we configured ambertools1.5/src
./configure gnu
it seems all things fine except following error....
Checking for zlib: testp.c:2:18: fatal error: zlib.h: No such file or
directory
compilation terminated.
./configure: line 1611: ./testp: No such file or directory
Not found.
Checking for libbz2: testp.c:2:19: fatal error: bzlib.h: No such file or
directory
compilation terminated.
./configure: line 1641: ./testp: No such file or directory
is this an error?
another thing want to ask you..
When typed *tleap* in the terminal
It showing the path..
I: Adding /home/subrata/AMBER/amber10/dat/leap/prep to search path.
-I: Adding /home/subrata/AMBER/amber10/dat/leap/lib to search path.
-I: Adding /home/subrata/AMBER/amber10/dat/leap/parm to search path.
-I: Adding /home/subrata/AMBER/amber10/dat/leap/cmd to search path.
It shows the path amber10 not amber11/ambertools/
is ambertools1.5 installed properly in the path?
Thanking You
On Thu, Feb 9, 2012 at 9:59 PM, David A Case <case.biomaps.rutgers.edu>wrote:
> On Thu, Feb 09, 2012, subrata paul wrote:
> >
> > First we installed amber10 with ambertools 1.2...
> > In this case tlaep is working but xleap is not working..
> >
> > then we tried to install ambertools 1.5 to work xleap..
> > but xleap is not working. why?
>
> Can you answer the questions I asked about your earlier email? (Was xleap
> actually installed for 1.5? Does tleap work?)
>
> ...dac
>
> >
> >
> > On Wed, Feb 8, 2012 at 10:00 PM, David A. Case <case.biomaps.rutgers.edu
> >wrote:
> >
> > > On Wed, Feb 08, 2012, subrata paul wrote:
> > >
> > > > $AMBER/amber11/AmberTools/src/leap/xleap -f leaprc.ff99SB
> > > > the error is
> > > > AMBER/amber11/AmberTools/src/leap/xleap: line 8:
> > > > /home/subrata/AMBER/amber11/AmberTools//bin/xaLeap: No such file or
> > > > directory
> > >
> > > Is the file present? It sounds like xleap was not actually installed.
> > > Please
> > > look carefully at the output from the configure step: it will report
> if X
> > > libraries are not available, and (if so) will skip building xleap.
> > >
> > > It would be great to test if tleap is working with the AmberTools 1.5
> code.
> > > That would narrow down the possible sources of error.
> > >
>
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>
--
*With Best Regards
Subrata
PhD Student
Dept of Chemistry.
IIT G
*
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Received on Thu Feb 09 2012 - 22:00:03 PST
