Re: [AMBER] installation

From: David A Case <case.biomaps.rutgers.edu>
Date: Thu, 9 Feb 2012 11:29:36 -0500

On Thu, Feb 09, 2012, subrata paul wrote:
>
> First we installed amber10 with ambertools 1.2...
> In this case tlaep is working but xleap is not working..
>
> then we tried to install ambertools 1.5 to work xleap..
> but xleap is not working. why?

Can you answer the questions I asked about your earlier email? (Was xleap
actually installed for 1.5? Does tleap work?)

...dac

>
>
> On Wed, Feb 8, 2012 at 10:00 PM, David A. Case <case.biomaps.rutgers.edu>wrote:
>
> > On Wed, Feb 08, 2012, subrata paul wrote:
> >
> > > $AMBER/amber11/AmberTools/src/leap/xleap -f leaprc.ff99SB
> > > the error is
> > > AMBER/amber11/AmberTools/src/leap/xleap: line 8:
> > > /home/subrata/AMBER/amber11/AmberTools//bin/xaLeap: No such file or
> > > directory
> >
> > Is the file present? It sounds like xleap was not actually installed.
> > Please
> > look carefully at the output from the configure step: it will report if X
> > libraries are not available, and (if so) will skip building xleap.
> >
> > It would be great to test if tleap is working with the AmberTools 1.5 code.
> > That would narrow down the possible sources of error.
> >

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Received on Thu Feb 09 2012 - 09:00:03 PST
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