Re: [AMBER] Amber on IBM Power7 or Opteron 6200 series?

From: Ross Walker <ross.rosswalker.co.uk>
Date: Wed, 26 Oct 2011 10:20:58 -0700

Hi Gustavo,

We were getting there on getting the whole of AMBER and AMBERTools compiled
on Blue Waters at NCSA although it is quite a lot of pain. We basically gave
up when IBM pulled the plug on the BlueWaters project. I'll see if I can dig
up the notes to send you.

All the best
Ross

> -----Original Message-----
> From: Gustavo Seabra [mailto:gustavo.seabra.gmail.com]
> Sent: Wednesday, October 26, 2011 10:14 AM
> To: AMBER Mailing List
> Subject: Re: [AMBER] Amber on IBM Power7 or Opteron 6200 series?
>
> Well,
>
> At the moment we are planning a new buy, one of the offers we got was
> for a Power7-based cluster. However, I have no information on
> compiling / running Amber on such systems, or benchmarks. So,
> basically I'd like information on what Linux flavor or compilers work
> best, possible hidden costs, benchmarks or any good/bad experiences
> people had with them.
>
> Thanks,
> Gustavo Seabra
> Professor Adjunto
> Departamento de Química Fundamental
> Universidade Federal de Pernambuco
> Fone: +55-81-2126-7417
>
>
>
> On Wed, Oct 26, 2011 at 1:24 PM, Carlos Sosa <sosa0006.r.umn.edu>
> wrote:
> > Gustavo,
> >
> > What information do you need on IBM POWER7?
> >
> > On Wed, Oct 26, 2011 at 11:17 AM, Gustavo Seabra
> > <gustavo.seabra.gmail.com>wrote:
> >
> >> Hi,
> >>
> >> I was just wondering if anyone here has experience installing /
> >> running Amber on the new IBM Power7 or the new AMD opteron 6200
> series
> >> (Bulldozer - Interlagos), and is wiling to share.
> >>
> >> Thanks,
> >> Gustavo Seabra
> >> Professor Adjunto
> >> Departamento de Química Fundamental
> >> Universidade Federal de Pernambuco
> >> Fone: +55-81-2126-7417
> >>
> >> _______________________________________________
> >> AMBER mailing list
> >> AMBER.ambermd.org
> >> http://lists.ambermd.org/mailman/listinfo/amber
> >>
> >
> >
> >
> > --
> > Carlos P Sosa, Ph.D.
> > Adjunct Assistant Professor
> > *Biomedical Informatics and Computational Biology* (BICB)
> > University of  Minnesota Rochester
> > 300 University
> Square<http://www1.umn.edu/twincities/maps/UniversitySquare/>
> > R0869A
> > 111 S Broadway
> > Rochester, MN 55904
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Oct 26 2011 - 10:30:05 PDT
Custom Search