Re: [AMBER] sander mpi error when unfolding the protein

From: <steinbrt.rci.rutgers.edu>
Date: Thu, 29 Sep 2011 03:55:22 -0400 (EDT)

Hi,

Fortran can be a bit userunfriendly when it comes to error messages, but
your mdout files should show the following too:

> Unit 30 Error on OPEN:
> ./ndm_heat4.rst

This is the crucial point, sander did not find the previous run's restart
file and therefore crashed. So go back to the step before (heat4?) and
check why that did not produce a restart. It most likely crashed as well,
so the task is to figure out why that happened.

Kind Regards,

Dr. Thomas Steinbrecher
formerly at the
BioMaps Institute
Rutgers University
610 Taylor Rd.
Piscataway, NJ 08854

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Received on Thu Sep 29 2011 - 01:00:05 PDT
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