[AMBER] Chirality restraints

From: Rajeswari A. <rajeswari.biotech.gmail.com>
Date: Thu, 29 Sep 2011 12:36:40 +0530

Dear Amber Users,

I created Chirality restraints file using makeCHIR_RST code in Amber. In
amber manual there is a line "Note that you may have to edit the output of
this program to change trans peptide constraints to cis, as appropriate."
Is this note is for proline? but proline may exist either as trans/cis. Can
someone explain what does it mean and how should i take care of proline
trans-peptide constraints?

Thanks in Advance

Rajeswari A
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Received on Thu Sep 29 2011 - 00:30:03 PDT
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