thank you sir
It is now working...
regards,
Souvik Sur
Ph. D. Student
Department Of Chemistry
University Of Delhi
India
> Date: Mon, 22 Aug 2011 11:30:38 +0530
> From: kshatresh.gmail.com
> To: amber.ambermd.org
> Subject: Re: [AMBER] Analysing the result after simulation
>
> Hi Souvik,
>
> You should copy process_mdout.perl file in your directory. Make it
> executable using chmod 755. And then run ./process_mdout.perl
> xxxx.out .
>
> I hope it will help
>
> Kshatresh
>
> On 8/22/11, souvik sur <souviksur.hotmail.com> wrote:
> >
> > Helo sir,
> >
> > I have so far done my simulation job in Amber9, I am now trying to analysing
> > the result using process_mdout.perl script following the amber tutorials but
> > when I had run the command process_mdout.perl ../... .out it showed like :
> >
> > [root.network result_1000ps]# ls
> > process_mdout.perl wat_nsn_ns_md_1000ps.out
> >
> > [root.network result_1000ps]# process_mdout.perl wat_nsn_ns_md_1000ps.out/
> > bash: process_mdout.perl: command not found
> >
> >
> > where is the problem lies, I have also checked the .perl script to show the
> > path and it was right. So can you please suggest me any solution for it.
> > waiting for your reply.
> >
> > regards,
> > Souvik Sur
> > Ph. D. Student
> > Department Of Chemistry
> > University Of Delhi
> > India
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
> --
> **************************************************************************************************************************
> Kshatresh Dutta Dubey
> Senior Research Fellow (SRF)
> Biophysics Unit,
> Department of Physics
> DDU Gorakhpur University
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Aug 21 2011 - 23:30:04 PDT
