Hi Souvik,
You should copy process_mdout.perl file in your directory. Make it
executable using chmod 755. And then run ./process_mdout.perl
xxxx.out .
I hope it will help
Kshatresh
On 8/22/11, souvik sur <souviksur.hotmail.com> wrote:
>
> Helo sir,
>
> I have so far done my simulation job in Amber9, I am now trying to analysing
> the result using process_mdout.perl script following the amber tutorials but
> when I had run the command process_mdout.perl ../... .out it showed like :
>
> [root.network result_1000ps]# ls
> process_mdout.perl wat_nsn_ns_md_1000ps.out
>
> [root.network result_1000ps]# process_mdout.perl wat_nsn_ns_md_1000ps.out/
> bash: process_mdout.perl: command not found
>
>
> where is the problem lies, I have also checked the .perl script to show the
> path and it was right. So can you please suggest me any solution for it.
> waiting for your reply.
>
> regards,
> Souvik Sur
> Ph. D. Student
> Department Of Chemistry
> University Of Delhi
> India
>
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> http://lists.ambermd.org/mailman/listinfo/amber
>
--
**************************************************************************************************************************
Kshatresh Dutta Dubey
Senior Research Fellow (SRF)
Biophysics Unit,
Department of Physics
DDU Gorakhpur University
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Received on Sun Aug 21 2011 - 23:30:02 PDT
