Re: [AMBER] Analysing the result after simulation

From: souvik sur <souviksur.hotmail.com>
Date: Mon, 22 Aug 2011 11:57:38 +0530

thank you sir

It is now working...


regards,
Souvik Sur
Ph. D. Student
Department Of Chemistry
University Of Delhi
India


> Date: Mon, 22 Aug 2011 14:01:07 +0800
> From: teonghan.gmail.com
> To: amber.ambermd.org
> Subject: Re: [AMBER] Analysing the result after simulation
>
> Hi,
>
> Try ./process_mdout.perl wat_nsn_ns_md_1000ps.out
>
> Thanks.
>
> On Mon, Aug 22, 2011 at 1:27 PM, souvik sur <souviksur.hotmail.com> wrote:
>
> >
> > Helo sir,
> >
> > I have so far done my simulation job in Amber9, I am now trying to
> > analysing the result using process_mdout.perl script following the amber
> > tutorials but when I had run the command process_mdout.perl ../... .out it
> > showed like :
> >
> > [root.network result_1000ps]# ls
> > process_mdout.perl wat_nsn_ns_md_1000ps.out
> >
> > [root.network result_1000ps]# process_mdout.perl wat_nsn_ns_md_1000ps.out/
> > bash: process_mdout.perl: command not found
> >
> >
> > where is the problem lies, I have also checked the .perl script to show the
> > path and it was right. So can you please suggest me any solution for it.
> > waiting for your reply.
> >
> > regards,
> > Souvik Sur
> > Ph. D. Student
> > Department Of Chemistry
> > University Of Delhi
> > India
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Regards,
> THChew
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Received on Sun Aug 21 2011 - 23:30:05 PDT
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