Dear Glad,
Thankyou I will try a more recent gcc version.
Kind regards,
Andre
----- Reply message -----
From: "Vlad Cojocaru" <vlad.cojocaru.mpi-muenster.mpg.de>
To: "AMBER Mailing List" <amber.ambermd.org>
Subject: [AMBER] Ambertools 1.5 make install error
Date: Sun, May 22, 2011 5:46 pm
Andre,
Do you have the option to use a newer GCC ? As I remember, it was a pain
to compile with 4.1 ...
4.3 and 4.5 work very well
Vlad
On 05/22/2011 01:22 AM, Andre Serobian wrote:
> Hi All,
>
> I have the same issue as http://archive.ambermd.org/201105/0149.html however there was no reply information from the user to solve the error.
>
> To recap, I am getting the following error after make install:
>
> In file included from sff.c:2278:
> mm_options.l: In function ‘mmolex’:
> mm_options.l:31: error: ‘hcp_h’ undeclared (first use in this function)
> mm_options.l:31: error: (Each undeclared identifier is reported only once
> mm_options.l:31: error: for each function it appears in.)
> mm_options.l:139: error: ‘cutres’ undeclared (first use in this function)
> make[1]: *** [sff.o] Error 1
> make[1]: Leaving directory `/usr/local/amber11/AmberTools/src/sff'
> make: *** [serial] Error 2
>
> To give more information, I am using the following:
> ./configure gnu
> CentOS 5.6 64bit
> flex version 2.5.4
> gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-50)
>
> Hope this helps solve the problem.
>
> Kind regards,
>
> Andre
>
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> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Dr. Vlad Cojocaru
Max Planck Institute for Molecular Biomedicine
Department of Cellular and Developmental Biology
Roentgenstrasse 20
48149 Muenster, Germany
tel: +49-251-70365-324
fax: +49-251-70365-399
email: vlad.cojocaru[at]mpi-muenster.mpg.de
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Received on Sun May 22 2011 - 03:30:02 PDT
