What are your system specs?
What OS are you running? What compiler versions are you using? What
configure command did you use?
On Sat, May 7, 2011 at 8:24 PM, Michael Forrester <mf1.iastate.edu> wrote:
> while trying to install ambertools I get the following error. Any ideas on
> a
> fix?
>
> ranlib /home/mf1/amber11/lib/librism.a
> gfortran -ffree-form -o rism1d rism1d.o \
> /home/mf1/amber11/lib/librism.a \
> /home/mf1/amber11/lib/arpack.a /home/mf1/amber11/lib/lapack.a
> /home/mf1/amber11/lib/blas.a
> /bin/mv rism1d /home/mf1/amber11/bin
> make[1]: Leaving directory `/home/mf1/amber11/AmberTools/src/rism'
> (cd cifparse && make install )
> make[1]: Entering directory `/home/mf1/amber11/AmberTools/src/cifparse'
> rm -f cifparse.a
> ar rv cifparse.a lex.cif.o cifp.tab.o cifparse.o
> ar: creating cifparse.a
> a - lex.cif.o
> a - cifp.tab.o
> a - cifparse.o
> ranlib cifparse.a
> mv cifparse.a /home/mf1/amber11/lib
> make[1]: Leaving directory `/home/mf1/amber11/AmberTools/src/cifparse'
> (cd sff && make install )
> make[1]: Entering directory `/home/mf1/amber11/AmberTools/src/sff'
> gcc -c -Dflex -O3 -mtune=generic -msse -mfpmath=sse -DBINTRAJ -DHASGZ
> -DHASBZ2 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DRISMSFF
> -o sff.o sff.c
> In file included from sff.c:859:0:
> eff.c: In function ‘mme34’:
> eff.c:4242:8: warning: passing argument 3 of ‘rism_thermo_’ from
> incompatible pointer type
> sff.h:215:8: note: expected ‘double *’ but argument is of type ‘double
> (*)[20]’
> In file included from sff.c:2278:0:
> mm_options.l: In function ‘mmolex’:
> mm_options.l:31:9: error: ‘hcp_h’ undeclared (first use in this function)
> mm_options.l:31:9: note: each undeclared identifier is reported only once
> for each function it appears in
> In file included from sff.c:2278:0:
> mm_options.l:139:9: error: ‘cutres’ undeclared (first use in this function)
> make[1]: *** [sff.o] Error 1
> make[1]: Leaving directory `/home/mf1/amber11/AmberTools/src/sff'
> make: *** [serial] Error 2
> _______________________________________________
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Sat May 07 2011 - 12:00:03 PDT
