Dear Prof case and jason
Here is the exact output of mdout file.
-------------------------------------------------------
Amber 10 SANDER 2008
-------------------------------------------------------
This output not change after several minutes. It looks like the computer
hang.
Do you have any suggest ?
On Tue, Aug 24, 2010 at 6:42 PM, case <case.biomaps.rutgers.edu> wrote:
> On Tue, Aug 24, 2010, setyanto tri wahyudi wrote:
> >
> > last time when I'm trying make hexane-water box using packmol. This is
> well
> > done.
> > It is also parameterized using tleap. But, there is a problem appear when
> > the system minimized.
> >
> > It is only shown like this...
> >
> > ==============================
> > AMBER 10
> > ==============================
>
> We would need many more details to be of any help. Be sure to cut and
> paste
> the *exact* outputs, etc. Be sure the test cases work. The first thing
> the
> sander program (if that is what you are running) does is print out the
> date;
> if you are not getting that, then the problem probably has nothing to do
> with
> packmol....
>
> ....dac
>
>
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--
Departemen Fisika
Institut Pertanian Bogor
Gedung Wing-S (depan Gymnasium)
Kampus IPB Darmaga
16680
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Received on Thu Aug 26 2010 - 00:30:03 PDT
