On Mon, Aug 23, 2010 at 11:02 AM, subrata paul <paul.subrata34.gmail.com>wrote:
> Dear Sir
>
> I am totaly new in amber10 and going through B1,B2,B3,B4 tutorial.Now I am
> want to simulate a system having disaccharide and Water.But, I can simulate
> one disaccharide (Glycam force field for disaccharide,.) by solvating in
> water. Now i want to increase the number of disaccharide molecules.
(do you mean that instead of one saccharide you want to simulate many units
of same disacchrides in water ?? )
> So how i increase the number of disacchride in the system. how we add this
> disaccharide molecule to a protein (I think you aare asking about docking
> ??? is it ??).
> please halp me regarding this .
> thank you in advance.
>
>
> subrata
> student
> Indian Instiute of Technology,Guwahati.
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Aug 23 2010 - 02:30:06 PDT
