Re: [AMBER] questions about installing pmend.cuda

From: Jason Swails <jason.swails.gmail.com>
Date: Tue, 3 Aug 2010 07:26:21 -0400

Why are you running the beta version of the cuda toolkit/sdk? Upgrade to
the latest version of the CUDA toolkit and SDK and upgrade your graphics
drivers accordingly. Then make clean and re-try to compile pmemd.cuda.

Good luck!
Jason

2010/8/3 宋德寿 <sds_1016.163.com>

> Hi ,
> thanks for the suggestion,but how can i setup CFLAGS parameter.
> Here are the informations about my GPU cards .
>
> [root.localhost cards]# cat /proc/driver/nvidia/cards/0
> Model: Tesla C1060
> IRQ: 122
> Video BIOS: 62.00.62.00.07
> Card Type: PCI-E
> DMA Size: 40 bits
> DMA Mask: 0xffffffffff
> Bus Location: 0000:03.00.0
> [root.localhost cards]# cat /proc/driver/nvidia/cards/1
> Model: Quadro FX 580
> IRQ: 130
> Video BIOS: 62.94.96.00.05
> Card Type: PCI-E
> DMA Size: 40 bits
> DMA Mask: 0xffffffffff
> Bus Location: 0000:04.00.0
> [root.localhost cards]# cat /proc/driver/nvidia/version
> NVRM version: NVIDIA UNIX x86_64 Kernel Module 256.35 Wed Jun 16 18:42:44
> PDT 2010
> GCC version: gcc version 4.1.2 20080704 (Red Hat 4.1.2-46)
>
>
>
>
> >setup your CFLAGS parameter
> >
> >在 2010年8月3日 下午12:45,宋德寿 <sds_1016.163.com> 写道:
> >> Dear Sir:
> >> My computer is DET7500 tower workstation. The computer has two
> graphics cards, one is FX580 the other is Tesla C1060. I followed your
> installation method(http://ambermd.org/gpus/), but I can not installall it
> well. What should I do?
> >>
> >> My operating system is RadHat server 5.4
> >>
> >>
> "cudatoolkit_3.0-beta1_linux_64_rhel5.3.run;gpucomputingsdk_3.0-beta1_linux.run;NVIDIA-Linux-x86_64-256.35.run,"
> have been installed,and MPI is running well.
> >>
> >> here are the errors:
> >>
> >>
> >> gputypes.h:73: error:'double4' Did not name a type
> >> gpu.cpp: In function 'void gpu_neighbor_list_setup_(int*, int*, double*,
> double*)':
> >> gpu.cpp:2451: Warinng:When converted to'int' (from 'PMEDouble')
> >> gpu.cpp:2452: Warinng:When converted to 'int' (from 'PMEDouble')
> >> gpu.cpp:2465: Warinng:When converted to 'int' (from 'PMEDouble')
> >> gpu.cpp:2466: Warinng:When converted to 'int' (from 'PMEDouble')
> >> gpu.cpp:2479: Warinng:When converted to 'int' (from 'PMEDouble')
> >> gpu.cpp:2480: Warinng:When converted to 'int' (from 'PMEDouble')
> >> make[3]: *** [gpu.o] error 1
> >> make[3]: Leaving directory `/sob/amber11/src/pmemd/src/cuda'
> >> make[2]: *** [-L/usr/local/cuda/lib64] errot 2
> >> make[2]: Leaving directory `/sob/amber11/src/pmemd/src'
> >> make[1]: *** [cuda] error 2
> >> make[1]: Leaving directory `/sob/amber11/src/pmemd'
> >> make: *** [cuda] error 2
> >>
> >>
> >> Thank
> you so much!
> >> Regards,
> >> DS -song
> >>
>
> 2010/8/2
> >>
> >>
> >>
> >> 网易邮箱,没有垃圾邮件的邮箱。
> >>
> >>
> >> 网易邮箱,没有垃圾邮件的邮箱。
> >> _______________________________________________
> >> AMBER mailing list
> >> AMBER.ambermd.org
> >> http://lists.ambermd.org/mailman/listinfo/amber
> >>
> >
> >_______________________________________________
> >AMBER mailing list
> >AMBER.ambermd.org
> >http://lists.ambermd.org/mailman/listinfo/amber
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>



-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Aug 03 2010 - 04:30:07 PDT
Custom Search