Re: [AMBER] questions about installing pmend.cuda

From: 宋德寿 <sds_1016.163.com>
Date: Wed, 4 Aug 2010 11:03:24 +0800 (CST)

Hi Jason,
    Thank you for your good suggestions.I have solve the problems.
 
Best wishes,
D.S. Song





>Why are you running the beta version of the cuda toolkit/sdk? Upgrade to
>the latest version of the CUDA toolkit and SDK and upgrade your graphics
>drivers accordingly. Then make clean and re-try to compile pmemd.cuda.
>
>Good luck!
>Jason
>
>2010/8/3 宋德寿 <sds_1016.163.com>
>
>> Hi ,
>> thanks for the suggestion,but how can i setup CFLAGS parameter.
>> Here are the informations about my GPU cards .
>>
>> [root.localhost cards]# cat /proc/driver/nvidia/cards/0
>> Model: Tesla C1060
>> IRQ: 122
>> Video BIOS: 62.00.62.00.07
>> Card Type: PCI-E
>> DMA Size: 40 bits
>> DMA Mask: 0xffffffffff
>> Bus Location: 0000:03.00.0
>> [root.localhost cards]# cat /proc/driver/nvidia/cards/1
>> Model: Quadro FX 580
>> IRQ: 130
>> Video BIOS: 62.94.96.00.05
>> Card Type: PCI-E
>> DMA Size: 40 bits
>> DMA Mask: 0xffffffffff
>> Bus Location: 0000:04.00.0
>> [root.localhost cards]# cat /proc/driver/nvidia/version
>> NVRM version: NVIDIA UNIX x86_64 Kernel Module 256.35 Wed Jun 16 18:42:44
>> PDT 2010
>> GCC version: gcc version 4.1.2 20080704 (Red Hat 4.1.2-46)
>>
>>
>>
>>
>> >setup your CFLAGS parameter
>> >
>> >在 2010年8月3日 下午12:45,宋德寿 <sds_1016.163.com> 写道:
>> >> Dear Sir:
>> >> My computer is DET7500 tower workstation. The computer has two
>> graphics cards, one is FX580 the other is Tesla C1060. I followed your
>> installation method(http://ambermd.org/gpus/), but I can not installall it
>> well. What should I do?
>> >>
>> >> My operating system is RadHat server 5.4
>> >>
>> >>
>> "cudatoolkit_3.0-beta1_linux_64_rhel5.3.run;gpucomputingsdk_3.0-beta1_linux.run;NVIDIA-Linux-x86_64-256.35.run,"
>> have been installed,and MPI is running well.
>> >>
>> >> here are the errors:
>> >>
>> >>
>> >> gputypes.h:73: error:'double4' Did not name a type
>> >> gpu.cpp: In function 'void gpu_neighbor_list_setup_(int*, int*, double*,
>> double*)':
>> >> gpu.cpp:2451: Warinng:When converted to'int' (from 'PMEDouble')
>> >> gpu.cpp:2452: Warinng:When converted to 'int' (from 'PMEDouble')
>> >> gpu.cpp:2465: Warinng:When converted to 'int' (from 'PMEDouble')
>> >> gpu.cpp:2466: Warinng:When converted to 'int' (from 'PMEDouble')
>> >> gpu.cpp:2479: Warinng:When converted to 'int' (from 'PMEDouble')
>> >> gpu.cpp:2480: Warinng:When converted to 'int' (from 'PMEDouble')
>> >> make[3]: *** [gpu.o] error 1
>> >> make[3]: Leaving directory `/sob/amber11/src/pmemd/src/cuda'
>> >> make[2]: *** [-L/usr/local/cuda/lib64] errot 2
>> >> make[2]: Leaving directory `/sob/amber11/src/pmemd/src'
>> >> make[1]: *** [cuda] error 2
>> >> make[1]: Leaving directory `/sob/amber11/src/pmemd'
>> >> make: *** [cuda] error 2
>> >>
>> >>
>> >> Thank
>> you so much!
>> >> Regards,
>> >> DS -song
>> >>
>>
>> 2010/8/2
>> >>
>> >>
>> >>
>> >> 网易邮箱,没有垃圾邮件的邮箱。
>> >>
>> >>
>> >> 网易邮箱,没有垃圾邮件的邮箱。
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>> >>
>> >
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>
>
>
>--
>Jason M. Swails
>Quantum Theory Project,
>University of Florida
>Ph.D. Graduate Student
>352-392-4032
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Received on Tue Aug 03 2010 - 20:30:03 PDT
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