Re: [AMBER] compile ambertools on mac

From: Jorgen Simonsen <jorgen589.gmail.com>
Date: Mon, 12 Jul 2010 23:34:39 +0200

Hi

make clean
make install 2> logloglog

On Mon, Jul 12, 2010 at 11:03 PM, Jason Swails <jason.swails.gmail.com>wrote:

> It looks to me as though we only got the stdout stream, not the stderr. Be
> sure to put a 2>&1 at the end to redirect error to output (for bash/sh,
> that
> is).
>
> All the best,
> Jason
>
> On Mon, Jul 12, 2010 at 4:50 PM, Jorgen Simonsen <jorgen589.gmail.com
> >wrote:
>
> > Hi
> >
> > I have deleted the suggested files
> > make clean
> >
> > remove config.h - reconfigured and then make install
> >
> > but I get the same error as earlier I have attached the log file from the
> > make install run if anybody can make sense of it.
> >
> >
> >
> > On Mon, Jul 12, 2010 at 3:08 PM, case <case.biomaps.rutgers.edu> wrote:
> >
> > > On Mon, Jul 12, 2010, Jorgen Simonsen wrote:
> > > >
> > > > So the output is from the nm libdrfftw.a | grep
> > rfftw3d_f77_create_plan
> > > > is
> > > > nm: no name list
> > >
> > > This is pretty bad...I suggest deleting libdrfftw.a and libdfftw.a (and
> > the
> > > corresponding *.la file, if they are there), making sure you do a "make
> > > clean"
> > > in $AMBERHOME/AmberTools/src, then re-running configure, looking
> > carefully
> > > for errors at that step. Follow this with a "make install", again
> > looking
> > > for errors in the fftw parts. For some reason, you are not correctly
> > > creating
> > > the fftw files.
> > >
> > > ...dac
> > >
> > >
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> >
> > _______________________________________________
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> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> >
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>


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Received on Mon Jul 12 2010 - 15:00:03 PDT
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