Re: [AMBER] compile ambertools on mac

From: Jason Swails <jason.swails.gmail.com>
Date: Mon, 12 Jul 2010 17:03:17 -0400

It looks to me as though we only got the stdout stream, not the stderr. Be
sure to put a 2>&1 at the end to redirect error to output (for bash/sh, that
is).

All the best,
Jason

On Mon, Jul 12, 2010 at 4:50 PM, Jorgen Simonsen <jorgen589.gmail.com>wrote:

> Hi
>
> I have deleted the suggested files
> make clean
>
> remove config.h - reconfigured and then make install
>
> but I get the same error as earlier I have attached the log file from the
> make install run if anybody can make sense of it.
>
>
>
> On Mon, Jul 12, 2010 at 3:08 PM, case <case.biomaps.rutgers.edu> wrote:
>
> > On Mon, Jul 12, 2010, Jorgen Simonsen wrote:
> > >
> > > So the output is from the nm libdrfftw.a | grep
> rfftw3d_f77_create_plan
> > > is
> > > nm: no name list
> >
> > This is pretty bad...I suggest deleting libdrfftw.a and libdfftw.a (and
> the
> > corresponding *.la file, if they are there), making sure you do a "make
> > clean"
> > in $AMBERHOME/AmberTools/src, then re-running configure, looking
> carefully
> > for errors at that step. Follow this with a "make install", again
> looking
> > for errors in the fftw parts. For some reason, you are not correctly
> > creating
> > the fftw files.
> >
> > ...dac
> >
> >
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> >
>
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>
>


-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Mon Jul 12 2010 - 14:30:03 PDT
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