[AMBER] regarding K+ ions

From: Asfa Ali <asfa.iisc.gmail.com>
Date: Fri, 28 May 2010 11:02:45 +0530

Hi,

In the crystal structure, I have two K+ ions in the centre of DNA
(quadruplex). After production run, one of the ions move out from the tetrad
to the bulk solution and no K+ ion from the bulk solution replaces it.

I guess that the K+ should be present in the tetrad as it was found in the
crystal structure. Is the result feasible?

Asfa.
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Received on Thu May 27 2010 - 23:00:03 PDT
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