Hi Jason,
>
> Although a question to potentially help future users that may struggle with
> this: Did you have to go into the netcdf directory itself and do a "make
> distclean" or something related? Or was "make clean" in $AMBERHOME/src
> enough?
After I modified configure_at (removing -m32) I did "./confgure_at gcc" "make -f Makefile_at clean" , and "make -f Makefile_at".
>
> About the test problem, I believe the segfault associated with the NAB test
> you see failing is also fixed in AmberTools 1.4..
>
I also modified configure_amber same way, "./configure_amber gfortran" "make serial" and make stopped with the following message,
------------------------------------------------------------------------------
gfortran -c -O0 -fno-range-check -fno-second-underscore -ffree-form -I../../sander -I../src/include -DHAS_LAPACK -DQMMM -o ../obj/dpwritepot.o ../src/pb/dpwritepot.F90
../src/pb/dpwritepot.F90:83.70:
write(string,'("object 3 class array type double rank 0 items ",I," data f
1
Error: Nonnegative width required in format string at (1)
../src/pb/dpwritepot.F90:138.70:
write(string,'("object 3 class array type double rank 0 items ",I," data f
1
Error: Nonnegative width required in format string at (1)
make[3]: *** [../obj/dpwritepot.o] Error 1
make[2]: *** [libdivcon.a] Error 2
make[1]: *** [divcon] Error 2
make: *** [serial] Error 2
--------------------------------------------------------------------------------
Kensuke Nakamura
Nara Institute of Science and Technology
Graduate School of Information Science
8916-5 Takayama, Ikoma, Nara 630-0101
JAPAN
TEL: +81-743-72-5257 (Fax:5258)
E-mail: kensuke-nm.is.naist.jp
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Received on Fri May 21 2010 - 17:30:03 PDT
