Did make clean, ran configure again, and ran make again.
I get the same error on arpack.a and an additional one:
Starting installation of AmberTools, version 1.4 serial at Mon May 17 14:20:35 EDT 2010.
(cd ucpp-1.3 && make install )
gcc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DSTAND_ALONE mem.c
gcc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DSTAND_ALONE nhash.c
gcc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DSTAND_ALONE cpp.c
gcc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DSTAND_ALONE lexer.c
gcc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DSTAND_ALONE assert.c
gcc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DSTAND_ALONE macro.c
gcc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DSTAND_ALONE eval.c
gcc -o ucpp mem.o nhash.o cpp.o lexer.o assert.o macro.o eval.o
mv ucpp /usr/local/amber11/bin
(cd byacc && make install )
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o closure.o closure.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o error.o error.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o lalr.o lalr.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o lr0.o lr0.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o main.o main.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o mkpar.o mkpar.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o output.o output.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o reader.o reader.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o skeleton.o skeleton.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o symtab.o symtab.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o verbose.o verbose.c
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -c -o warshall.o warshall.c
mv yacc /usr/local/amber11/bin
(cd arpack && make install );
gfortran -c -O3 -mtune=generic -o ivout.o ivout.f
gfortran -c -O3 -mtune=generic -o dvout.o dvout.f
gfortran -c -O3 -mtune=generic -o dgetv0.o dgetv0.f
gfortran -c -O3 -mtune=generic -o dlaqrb.o dlaqrb.f
gfortran -c -O3 -mtune=generic -o dnaitr.o dnaitr.f
gfortran -c -O3 -mtune=generic -o dnapps.o dnapps.f
gfortran -c -O3 -mtune=generic -o dnaup2.o dnaup2.f
gfortran -c -O3 -mtune=generic -o dnaupd.o dnaupd.f
gfortran -c -O3 -mtune=generic -o dnconv.o dnconv.f
gfortran -c -O3 -mtune=generic -o dneigh.o dneigh.f
gfortran -c -O3 -mtune=generic -o dmout.o dmout.f
gfortran -c -O3 -mtune=generic -o dneupd.o dneupd.f
gfortran -c -O3 -mtune=generic -o dngets.o dngets.f
gfortran -c -O3 -mtune=generic -o dsaitr.o dsaitr.f
gfortran -c -O3 -mtune=generic -o dsapps.o dsapps.f
gfortran -c -O3 -mtune=generic -o dsaup2.o dsaup2.f
gfortran -c -O3 -mtune=generic -o dsaupd.o dsaupd.f
gfortran -c -O3 -mtune=generic -o dsconv.o dsconv.f
gfortran -c -O3 -mtune=generic -o dseigt.o dseigt.f
gfortran -c -O3 -mtune=generic -o dsesrt.o dsesrt.f
gfortran -c -O3 -mtune=generic -o dseupd.o dseupd.f
gfortran -c -O3 -mtune=generic -o dsgets.o dsgets.f
gfortran -c -O3 -mtune=generic -o dsortc.o dsortc.f
gfortran -c -O3 -mtune=generic -o dsortr.o dsortr.f
gfortran -c -O3 -mtune=generic -o dstatn.o dstatn.f
gfortran -c -O3 -mtune=generic -o dstats.o dstats.f
gfortran -c -O3 -mtune=generic -o dstqrb.o dstqrb.f
gfortran -c -O3 -mtune=generic -o dsarpack.o dsarpack.f
dsarpack.f:424.3:
12 go to 11
1
dsarpack.f:199.15:
go to (12,18) label
2
Warning: Label at (1) is not in the same block as the GOTO statement at (2)
dsarpack.f:545.3:
18 go to 17
1
dsarpack.f:199.18:
go to (12,18) label
2
Warning: Label at (1) is not in the same block as the GOTO statement at (2)
gcc -c -O3 -mtune=generic -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -o wallclock.o wallclock.c
ar rv arpack.a ivout.o dvout.o dgetv0.o dlaqrb.o dnaitr.o dnapps.o dnaup2.o dnaupd.o dnconv.o dneigh.o dmout.o dneupd.o dngets.o dsaitr.o dsapps.o dsaup2.o dsaupd.o dsconv.o dseigt.o dsesrt.o dseupd.o ds.o dsortc.o dsortr.o dstatn.o dstats.o dstqrb.o dsarpack.o wallclock.o
ar: arpack.a is a fat file (use libtool(1) or lipo(1) and ar(1) on it)
ar: arpack.a: Inappropriate file type or format
make[1]: *** [arpack.a] Error 1
make: *** [serial] Error 2
On May 17, 2010, at 2:02 PM, Mengjuei Hsieh wrote:
> On Mon, May 17, 2010 at 10:46 AM, erik zuiderweg <zuiderwe.umich.edu> wrote:
>
>> Done, and I am OK now with the compilers.
>> ar rv arpack.a ivout.o dvout.o dgetv0.o dlaqrb.o dnaitr.o dnapps.o dnaup2.o
>> dnaupd.o dnconv.o dneigh.o dmout.o dneupd.o dngets.o dsaitr.o dsapps.o
>> dsaup2.o dsaupd.o dsconv.o dseigt.o dsesrt.o dseupd.o dsgets.o dsortc.o
>> dsortr.o dstatn.o dstats.o dstqrb.o dsarpack.o wallclock.o
>> ar: arpack.a is a fat file (use libtool(1) or lipo(1) and ar(1) on it)
>> ar: arpack.a: Inappropriate file type or format
>> make[1]: *** [arpack.a] Error 1
>> make: *** [serial] Error 2
>
>
> This still means that you need that "make clean" I think.
>
> --
> Mengjuei
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>
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Received on Mon May 17 2010 - 12:00:03 PDT
