Re: [AMBER] installation on MacOS10.6

From: Paul S. Nerenberg <psn.berkeley.edu>
Date: Sat, 15 May 2010 08:54:43 -0700

Hi Erik,

I think the standard recommendation here would actually be gcc44 since
it is more mature, but I have compiled using gcc45 on my machine
(admittedly running MacOS 10.5, *not* 10.6) and it seems to work
fine. Definitely install the gcc_select package, so that you can
easily switch been linking to the "real" GNU or the Apple-provided
compilers when the need arises. Finally (and I think someone already
suggested this), I strongly recommend that you check out the "AMBER on
Mac" website run by Mengjuei and others: http://
amberonmac.blogspot.com/. The installation guides on that site have
been pretty much foolproof in my experience.

Best,

Paul


On May 15, 2010, at 8:11 AM, erik zuiderweg wrote:

> Which fortran package should I get from Macports for my macbook pro?
>
> qd 2.3.9 (C++/Fortran-90 double-double and quad-double looks
> attractive to me
>
> or gcc45 ?
>
>
>
> On May 14, 2010, at 9:00 PM, case wrote:
>
>> On Fri, May 14, 2010, Jason Swails wrote:
>>>
>>>> Indeed, you can mixed gfortran with apple gcc if you do instead of
>>>> gcc -o testp testp.c.o testp.f.o -lgfortran -framework Accelerate
>>>> use
>>>> gfortran -o testp testp.c.o testp.f.o -framework Accelerate
>>
>> Yes, but this won't get you very far with AmberTools, which always
>> uses
>> the former usage, not the latter. Basically, unless you want to
>> really spend
>> a lot of time re-writing AmberTools, you need to install compilers
>> that
>> work for the first of the options above. Following advice of
>> others, I've
>> had good luck with macports for both 10.5 and 10.6, but I had
>> relatively
>> new machines, and am certainly no expert on all the possible
>> combinations
>> of compilers that people might want or need to use. But it seems
>> worthwhile
>> to try to get gcc and gfortran at the same version level.
>>
>> ....dac
>>
>>
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>>
>>
>
>
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Received on Sat May 15 2010 - 09:00:04 PDT
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