Thank you Ross and Jason.
We'll keep this in mind once we get the new version and compile it for the
GTX285 Mac version. Also we'll post any new issues, if we find any.
Thanks again,
AXEL
2010/5/4 Jason Swails <jason.swails.gmail.com>
> Hello,
>
> On Tue, May 4, 2010 at 10:17 AM, Axel <axbchb.gmail.com> wrote:
>
> > Hi there,
> >
> > we have some MacPros in our lab with GTX285 cards and plan to update
> Amber
> > to the new version. It would be great if we could take advantage of these
> > to
> > run the CUDA version of PMEMD.
> >
> > Has anyone compiled and tested the CUDA version of pmemd on this type of
> > configuration?
> >
>
> I have tried compiling pmemd.cuda on my macbook. It is difficult. You
> essentially have to use ./configure.advanced in the $AMBERHOME/src/pmemd in
> my experience. Also make sure you've built gnu 4.3 from macports, since I
> don't think cuda works with 4.4 and later...
>
> Then, to use the nvcc for mac (which only compiles in 32-bit), you have to
> add -m32 to all of the flags (cflags, cppflags, fflags, etc.).
>
> That's enough to get started, I suppose.
>
> Good luck!
> Jason
>
>
> > Thanks in advance,
> >
> > AXEL
> >
> > --
> > Axel Bidon-Chanal Badia
> > Departament de Fisicoquímica
> > Facultat de Farmàcia
> > Universitat de Barcelona
> > Av. Joan XXII s/n,
> > 08028 Barcelona
> > Spain
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Axel Bidon-Chanal Badia
Departament de Fisicoquímica
Facultat de Farmàcia
Universitat de Barcelona
Av. Joan XXII s/n,
08028 Barcelona
Spain
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Received on Tue May 04 2010 - 09:00:04 PDT
