Hi. I am trying to install ambertools on a mac. I installed MacPorts and I
have the intel version of the ifort compiler to compile fortran. Do I still
need to install gfortran?
*When I try to run "./compile gnu" I get the following error messages:*
Emily-Curtis-MacBook-Pro:src emily$ ./configure gnu
Your AMBERHOME environment variable should be set to
/Users/emily/amber11/amber11
Obtaining the gnu suite version:
gcc -v
The version is 4.2.1
Testing the gcc compiler:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c
OK
Validating the C++ compiler version:
g++ -v
The version is 4.2.1
OK
Testing the gfortran compiler:
gfortran -O0 -o testp testp.f
./configure: line 1019: gfortran: command not found
./configure: line 1020: ./testp: No such file or directory
Unable to compile a Fortran program using gfortran -O0
We will be unable to compile sqm
Testing mixed C/Fortran compilation:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -c -o testp.c.o testp.c
gfortran -O0 -c -o testp.f.o testp.f
./configure: line 1054: gfortran: command not found
gcc -o testp testp.c.o testp.f.o -lgfortran
i686-apple-darwin10-gcc-4.2.1: testp.f.o: No such file or directory
./configure: line 1057: ./testp: No such file or directory
WARNING: Unable to compile mixed C/Fortran code.
Testing pointer size:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o test_pointer_size
test_pointer_size.c
Detected 64 bit operating system.
Testing flex:
OK
Configuring NetCDF; (may be time-consuming)
Error: NetCDF configure returned 1
NetCDF configure failed! Check the netcdf_config.log file.
Continuing but NetCDF will be skipped.
Configuring fftw-2.1.5; (may be time-consuming)
Error: fftw configure returned 1
fftw configure failed! Check the fftw2_config.log file.
*If I try to run using "./configure intel" I get the following error
messages:*
Emily-Curtis-MacBook-Pro:src emily$ ./configure intel
Your AMBERHOME environment variable should be set to
/Users/emily/amber11/amber11
./configure: line 571: [: : integer expression expected
./configure: line 600: [: : integer expression expected
Testing the icc compiler:
icc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c
./configure: line 966: icc: command not found
./configure: line 967: ./testp: No such file or directory
Error: Unable to compile a C program using icc -D_FILE_OFFSET_BITS=64
-D_LARGEFILE_SOURCE
Please check your compiler settings or configure flags.
Emily-Curtis-MacBook-Pro:src emily$
Thank you for any help.
Emily
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Received on Tue May 04 2010 - 06:30:05 PDT
