[AMBER] TER dfinition at the middile of pdb file

From: Homa Azizian <homa.azizian.anu.edu.au>
Date: Sat, 01 May 2010 03:41:38 +0300

Hi,
I have a non-standard residue in my pdb file which define with HETATM. after I prepare the parameter for that non-standard residue, and load the pdb in xleap, and after saving the pdb file, The "TER" definition come after my residue in pdb file. is it mean that it recognize my system as 2 separate system and treat it like 2 chain protein? should I change the HETATOM in original pdb file to ATOM?
Thank you for replying
Regards,
Homa
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Received on Fri Apr 30 2010 - 18:00:03 PDT
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