Dear all,
I have just compiled Amber Tools 1.2 on Snow Leopard
but when I run a test I find this problem
make -f Makefile_at test
( cd nab; make test )
=====================================================
Running test to make dna duplex:
/bin/sh: line 1: 33406 Segmentation fault ./duplex < duplex.in
make[1]: *** [duplex_test] Error 139
make: *** [test.nab] Error 2
Any suggestion to fix this issue.
Regards
On 28 January 2010 01:11, Mengjuei Hsieh <mjhsieh.gmail.com> wrote:
> On Wed, Jan 27, 2010 at 4:57 PM, Jason Swails <jason.swails.gmail.com>
> wrote:
> > Amber10 should work on Snow Leopard (as well as ambertools 1.3).
> > However, you should make sure that you have compatible compilers (i.e.
> > a gfortran compiler that builds 64-bit binaries, that you can get
> > either from MacPorts or hpc.sourceforge.net).
>
> Hi,
>
> As Jason said, the compilation should work on Mac OS 10.6. However if
> you are having architecture problem when linking the binaries, just
> get rid of "-m32"s from your config_amber.h, and make clean and
> re-build them all.
>
> I apologize that I haven't been able to update amberonmac blog as
> frequently as I wanted to be, but I should be able to update it this
> week to reflect the tips that we had discussed in the mailing list.
>
> Ps. If anyone here wants to co-author amberonmac blog, please just
> drop me an email, I'll send you an invite. :-)
>
> Best,
> --
> Mengjuei
>
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>
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Received on Thu Jan 28 2010 - 01:30:02 PST
