Re: [AMBER] test.MMPBSA_Nmode

From: Ray Luo, Ph.D. <ray.luo.uci.edu>
Date: Fri, 22 Jan 2010 06:51:41 -0800

Indeed, a few nmode numbers cannot be exactly reproduced in
test.MMPBSA_Nmode due to a change in the nmode program. This is a normal
behavior.

All the best,
Ray

2010/1/22 Antonija Tomić <Antonija.Tomic.irb.hr>

> Dear Amber Users,
>
> I must admit I am a part of Amber community who still has problems with
> mm_pbsa.
> MMPBSA Stability, Binding, ... is working very well, but when I try to do:
>
> $make test.MMPBSA_Nmode
>
> I get the following message.
>
> cd 04_MMPBSA_Nmode/; /usr/local/amber10/exe/mm_pbsa.pl mm_pbsa.in >
> mm_pbsa.log 2>&1
>
> make: *** [test.MMPBSA_Nmode] Error 25
>
>
> I am wondering if someone has encounter the same problem? Any suggestions
> how to solve it?
> I tried to find the solution on google but I failed.
>
> Kind regards,
> Antonija
>
>
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Received on Fri Jan 22 2010 - 07:00:05 PST
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