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Hi Dan,
will try so, but where should $AMBERHOME point to? Amber10 or like
ambertools amber11?
I'll try with both and tell you later on...
Best
Stef
On 1/12/10 3:32 PM, Daniel Roe wrote:
> Hi Stefan,
>
> I'm not 100% certain, but since AmberTools 1.3 contains many
> updates to the configure/compile process (one of the reasons it
> extracts to amber11) it's likely that it is not completely
> compatible with the amber 10 install process. Try to keep the two
> separate and see if you can do a fresh install of amber10 by
> itself, in its own directory.
>
> -Dan
>
> Stefan weber wrote: Hello,
>
> just a complete newbie with amber. I tried to install amber10 on
> ubuntu 9.10 64bit. and got follwing problem. compiling starts
> (amber -- ambertools v 1.3 are already done and tests are fine),
> running a while and stopping with error do not find lapack.a and
> blas.a. Both files where created just before and moved to the
> $AMBERHOME/lib directory. Any help?
>
> Ok there are some other strange things before. All documentation
> telling me ambertools and amber should be unpacked in one
> directory, trying to do so amber10 extracts in amber10 and
> ambertools1.3 in amber11. So to put them in one directory I
> unpacked amber10 (to /usr/local/amber10) renamed folder amber10 to
> amber11; unpacked ambertools and renamed the stuff back to amber10,
> setting environment ($AMBERHOME) and PATH pointing to
> /usr/local/amber10, then I patched everything (first ambertools
> then amber10 and then starting to compile. As said before
> ambertools v 1.3 compiled fine, run ambertools tests fine and then
> run into trouble compiling amber10.
>
> I attached the logfile from compiling amber10 ( make serial >>
> make-serial.log 2>&1 )
>
> Any Help?
>
> -- Stefan Weber Tel: +497612034642
>
> Rechenzentrum der Universität Freiburg Hermann-Herder-Str. 10
> D-79104 Freiburg
>
> ++ Das Leben -- so wie es wirklich ist -- ist nicht der Kampf
> zwischen Gut und Böse, sondern zwischen Böse und noch Schlimmerem.
> ++
>>
- --
Stefan Weber
Tel: +497612034642
Rechenzentrum der Universität Freiburg
Hermann-Herder-Str. 10
D-79104 Freiburg
++ Das Leben -- so wie es wirklich ist --
ist nicht der Kampf zwischen Gut und Böse,
sondern zwischen Böse und noch Schlimmerem. ++
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Received on Tue Jan 12 2010 - 07:00:04 PST
