Hi Stefan,
I'm not 100% certain, but since AmberTools 1.3 contains many updates to
the configure/compile process (one of the reasons it extracts to
amber11) it's likely that it is not completely compatible with the amber
10 install process. Try to keep the two separate and see if you can do a
fresh install of amber10 by itself, in its own directory.
-Dan
Stefan weber wrote:
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> Hello,
>
> just a complete newbie with amber. I tried to install amber10 on
> ubuntu 9.10 64bit. and got follwing problem. compiling starts (amber
> - -- ambertools v 1.3 are already done and tests are fine), running a
> while and stopping with error do not find lapack.a and blas.a. Both
> files where created just before and moved to the $AMBERHOME/lib
> directory. Any help?
>
> Ok there are some other strange things before. All documentation
> telling me ambertools and amber should be unpacked in one directory,
> trying to do so amber10 extracts in amber10 and ambertools1.3 in
> amber11. So to put them in one directory I unpacked amber10 (to
> /usr/local/amber10) renamed folder amber10 to amber11; unpacked
> ambertools and renamed the stuff back to amber10, setting environment
> ($AMBERHOME) and PATH pointing to /usr/local/amber10, then I patched
> everything (first ambertools then amber10 and then starting to
> compile. As said before ambertools v 1.3 compiled fine, run ambertools
> tests fine and then run into trouble compiling amber10.
>
> I attached the logfile from compiling amber10 ( make serial >>
> make-serial.log 2>&1 )
>
> Any Help?
>
> - --
> Stefan Weber
> Tel: +497612034642
>
> Rechenzentrum der Universität Freiburg
> Hermann-Herder-Str. 10
> D-79104 Freiburg
>
> ++ Das Leben -- so wie es wirklich ist --
> ist nicht der Kampf zwischen Gut und Böse,
> sondern zwischen Böse und noch Schlimmerem. ++
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--
Daniel R. Roe, Ph.D.
Research Chemist
National Institute of Standards and Technology
100 Bureau Drive, Stop 8443
Gaithersburg, MD 20899-8443
(301) 975-8741
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Received on Tue Jan 12 2010 - 07:00:03 PST
