AMBER: # of ligands and receptors in mmpbsa

From: Christopher Gaughan <clgaughan68.gmail.com>
Date: Fri, 25 Jul 2008 10:57:03 -0400

In the input file for generating snapshots from a single directory, there is
a part where you can specify which atoms are part of the receptor and those
that are part of the ligand as in:

NUMBER_LIG_GROUPS 1
LSTART 4081
LSTOP 4684
NUMBER_REC_GROUPS 1
RSTART 1
RSTOP 4080
RSTART 0
RSTOP 0


Here- one can add another receptor group. Can I also add another ligand
group as well- ie. can I have two receptors and twp ligands? Is there some
limitation in the code that does not allow for this?

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
      to majordomo.scripps.edu
Received on Sun Jul 27 2008 - 06:07:51 PDT
Custom Search