AMBER: analysing normal modes

From: Vahdati N. <nadiav.soton.ac.uk>
Date: Tue, 8 Jul 2008 19:03:39 +0100

Dear amber users,

Apart from IED, are there any other tools or scripts that can be used to generate frames along normal modes caluclated by nmode (amber) or NAB?
I can use ptraj to generate fluctuation plots along the normal modes but I am interested in generating frames to visualise.

Thank you in advance for your help,

Nadia

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Received on Wed Jul 09 2008 - 06:07:44 PDT
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