From: Anna Reymer <>
Date: Tue, 1 Jul 2008 10:36:12 +0200 (CEST)

Dear All,
I am doing the loop modelling and have the following problem running
ambpdb from xleap window in AMBER10:

>ambpdb -p myfile.prmtop < myfile.inpcrd > myfile.pdb
ERROR: syntax error

The myfile.prmtop and myfile.inpcrd were created properly.
Any suggestions?


Anna Reymer, PhD student
Physical Chemistry,
Department of Chemical and Biological Engineering
Chalmers University of Technology
Kemivägen 10
SE-412 96 Gothenburg

Phone: +46-(0)31-7722815

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Received on Wed Jul 02 2008 - 06:07:34 PDT
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