Re: AMBER: About RAMD

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Sat, 5 Jan 2008 11:12:40 -0500

what is RAMD? do you mean REMD? if so, that is available
in Amber9.


On Jan 5, 2008 5:39 AM, Francesco Pietra <chiendarret.yahoo.com> wrote:

> I was just informed from Professor Wade that RAMD at the moment can only
> be
> implemented into Amber 8.
>
> As I am most curious to try to follow the path of a ligand out of a
> protein
> embedded in a membrane, is it possible to get Amber 8 (having a personal
> license for Amber 9) and temporarily, for that computation, install it on
> the
> same machine (dual opterons, shared memory) without unistalling Amber 9?
> Amber
> 9 was ifort/icc compiled, parallel support from OpenMPI 1.2.3.
>
> Thanks
>
> francesco pietra
>
>
>
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-- 
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Carlos L. Simmerling, Ph.D.
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Stony Brook University              E-mail: carlos.simmerling.gmail.com
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Received on Sun Jan 06 2008 - 06:07:07 PST
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