Amber Archive May 2007 by messages with attachments

404 messages: Starting Wed May 02 2007 - 06:07:31 PDT, Ending Tue May 03 2011 - 19:00:02 PDT
This period: Most recent messages
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AMBER: md output file deepti nayar (Thu May 03 2007 - 02:06:24 PDT)
1. md_classical.in (201 bytes)
2. md_classical.out (57104 bytes)
AMBER: REF file problem deepti nayar (Sun May 06 2007 - 23:49:53 PDT)
1. md_classical.in (213 bytes)
2. md_classical.out (4943 bytes)
AMBER: Compiling parallel Amber9 on Linux cluster Jesus Angulo (Wed May 09 2007 - 03:27:23 PDT)
1. att8d696.gif (102 bytes)
2. att8d697.gif (102 bytes)
3. config.h (3450 bytes)
AMBER: leap problem Achuth Prabhu (Wed May 09 2007 - 05:03:51 PDT)
1. 50poly.mol2 (91961 bytes)
2. 50poly.prepi (70894 bytes)
3. 50poly.frcmod (178 bytes)
AMBER: leap problem Achuth Prabhu (Wed May 09 2007 - 05:28:01 PDT)
1. 50poly.mol2 (91961 bytes)
2. 50poly.prepi (70894 bytes)
3. 50poly.frcmod (178 bytes)
Re: AMBER: pmemd source issues Thomas Zeiser (Wed May 09 2007 - 08:00:00 PDT)
1. config.h (981 bytes)
2. check (467 bytes)
RE: AMBER: Compiling parallel Amber9 on Linux cluster Ross Walker (Wed May 09 2007 - 08:27:36 PDT)
1. att8d696.gif (102 bytes)
2. att8d697.gif (102 bytes)
AMBER: Missing BELE for MM in 1 (residue 47) AYTUG TUNCEL (Thu May 10 2007 - 00:32:26 PDT)
1. mm_pbsa.log (35520 bytes)
2. mm_pbsa.in (6585 bytes)
AMBER: restraint_wt and fixing chi deepti nayar (Thu May 10 2007 - 03:44:40 PDT)
1. md_classical.in (267 bytes)
2. TOR.180bb (596 bytes)
Re: AMBER: bug in reprocessing with PB? David Mobley (Thu May 10 2007 - 12:18:23 PDT)
1. amber_bug.tar.gz (126565 bytes)
AMBER: antechamber Santanu Roy (Fri May 11 2007 - 22:50:13 PDT)
1. model.pdb (2765 bytes)
AMBER: restraining atoms deepti nayar (Sun May 13 2007 - 21:39:15 PDT)
1. md_classical.in (232 bytes)
AMBER: deeper problem with the energetics Pankaj R. Daga (Thu May 17 2007 - 06:46:33 PDT)
1. eqlb3.out (53162 bytes)
2. eqlb3.in (448 bytes)
Re: AMBER: REMD error Jason K (Thu May 24 2007 - 08:31:17 PDT)
1. pREMD2.bash (649 bytes)
2. groupfile (244 bytes)
3. rem.in.000 (449 bytes)
4. rem.in.001 (448 bytes)
Re: AMBER: error in running sander devrani mitra (Tue May 29 2007 - 14:27:09 PDT)
1. a_min_water.out (8289 bytes)
Re: AMBER: (no subject) M. L. Dodson (Wed May 30 2007 - 10:54:04 PDT)
1. heatplot.pl (3762 bytes)
2. protein-heatplot.epsi (436650 bytes)
AMBER: cutoff & speed-up of GBSA Wei Chen (Wed May 30 2007 - 13:27:53 PDT)
1. GBSA.doc (101888 bytes)