Re: AMBER: amber equation of ff99

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Tue, 24 Apr 2007 12:18:57 -0400

yes it is the same, only the parameters differ.

On 4/24/07, Chengwen Chen <chenchengwen.gmail.com> wrote:
> Dear Amber user,
>
> In Amber website, the basic additive form of amber equation for Cornell et
> al. 1995 force field include just bonds, angles, dihedrals and nonbonded
> pairs, i.e. omitting polarization as well as the hydrogen
> bonding 10-12 term. I wonder if the equation for ff99 force field is the
> same ? Since I want to use the equation in my thesis, so I need an accurate
> answer.
>
> Thank you very much!
>
> Best Wishes,
> Chen Chengwen 


-- 
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Carlos L. Simmerling, Ph.D.
Associate Professor                 Phone: (631) 632-1336
Center for Structural Biology   Fax:   (631) 632-1555
CMM Bldg, Room G80
Stony Brook University        E-mail: carlos.simmerling.gmail.com
Stony Brook, NY 11794-5115
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Received on Wed Apr 25 2007 - 06:07:34 PDT
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