AMBER: Group in sander

From: xiaowei li <>
Date: Mon, 12 Apr 2004 15:05:29 -0400

Hi, I am using SANDER to minimize the energy of DNA before I calculate
its frequencies using NMODE. Because I do not want to restrain any
atoms in the mimization, so there is no group information in my input
file for sander. However, I got an error message ", Group
is not found at the end of file". Is the group information required for
any minimization in sander? Thank you!
Xiaowei Li
Department of Electrical and Computer Engineering
University of Virginia
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Mon Apr 12 2004 - 20:53:01 PDT
Custom Search