compatibility of amber with NAMD

From: Ioana Cozmuta <ioana_at_nas.nasa.gov>
Date: Thu 13 Feb 2003 10:42:41 -0800 (PST)

Dear Amber users,

I was wondering if anyone has any expertise in trying to use amber
generated files (topology especially) in NAMD. More specifically, is there
a way to use the .prmtop file as input for NAMD (so not to transform it
into a .psf file) if one also uses the amber force field in NAMD?

If this is not an option, does anyone know what is the simplest and
quickest way to "translate" the .prmtop file into a .psf file?

Thank you,
Ioana
Received on Thu Feb 13 2003 - 10:42:41 PST
Custom Search