movie for subset of atoms

From: Anton B. Guliaev <anton_at_vostok.lbl.gov>
Date: Thu 30 Aug 2001 13:42:14 -0700 (PDT)

Dear Amber Users,

I would like to create a movie based on MD trajectory for only a
subset of atoms. Let say RES 1-5 and a couple of solvent molecules
out of system with 240 residues in a water box. The programs i used
so far let me do it only if I recreate the new topology (or .parm in case
of VMD) file and load it together with the new (modified) coordinate
stream.
Is there any way to do it without creating a new .top file?

Thanks a lot,

Anton
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        * Anton B. Guliaev, Ph.D *
        * Life Sciences Division *
      _ * LBNL, Berkeley CA 94720 * _
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Received on Thu Aug 30 2001 - 13:42:14 PDT
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