On Tue, Apr 17, 2001, Mark Forster wrote:
>
>
> I have provided a simple fix with a PERL script to modify the atom names
> and columns used for an ambpdb generated PDB file.
There are many ways to skin a cat. Users might also want to look at
the "-wrap" option to ambpdb, which does about the same thing as this
perl script. This should generally be turned on if you need to communicate
to other programs, like RasMol or Insight.
In the next release, I think we will make the default output more like
"real" pdb and less like amber-pdb. I hope this will ease communication
with other programs.
...dac
--
==================================================================
David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
==================================================================
Received on Tue Apr 17 2001 - 09:27:19 PDT
