Amber Archive Dec 2025 by author

16 messages: Starting Tue Dec 02 2025 - 09:00:03 PST, Ending Thu Dec 11 2025 - 23:00:02 PST
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Arsene Marian Alain via AMBER
- [AMBER] Request download AmberTools24 source code (Thu Dec 04 2025 - 01:21:21 PST)
Arun Srikanth via AMBER
- Re: [AMBER] Question: Box size change during parametrization of rbLDH in 1M trehalose (Fri Dec 05 2025 - 12:25:00 PST)
cai.hanfeng--- via AMBER
- [AMBER] Question: Box size change during parametrization of rbLDH in 1M trehalose (Fri Dec 05 2025 - 10:55:44 PST)
Carlos Simmerling via AMBER
- Re: [AMBER] Custom Caps in AMBER and Compatibility with GROMACS (Tue Dec 02 2025 - 08:55:32 PST)
Daniel Roe via AMBER
- Re: [AMBER] Calculating a dot product between eigenvectors (Thu Dec 11 2025 - 05:40:36 PST)
David A Case via AMBER
Dulal Mondal via AMBER
- [AMBER] pmemd.cuda.MPI run stops (amber24) (Thu Dec 11 2025 - 22:51:05 PST)
Emme Burgin via AMBER
- [AMBER] &wt type='rest' not applied in Amber22 pmemd.cuda (Thu Dec 11 2025 - 08:36:38 PST)
Osman, Roman via AMBER
- [AMBER] Calculating a dot product between eigenvectors (Wed Dec 10 2025 - 19:29:58 PST)
Reza Khayat via AMBER
- [AMBER] Radius of phosphate (Fri Dec 05 2025 - 12:01:05 PST)
Sangita Kachhap via AMBER
- [AMBER] LINMIN failure (Wed Dec 03 2025 - 07:12:06 PST)
Siavoush Dastmalchi via AMBER
- [AMBER] Error: Bad topology file. Sum of ATOMS_PER_MOLECULE does not equal NATOM (Thu Dec 11 2025 - 04:34:39 PST)
Téletchéa Stéphane via AMBER
- Re: [AMBER] Custom Caps in AMBER and Compatibility with GROMACS (Tue Dec 02 2025 - 09:38:11 PST)
Xenidis, Vasilis via AMBER
- [AMBER] Custom Caps in AMBER and Compatibility with GROMACS (Tue Dec 02 2025 - 08:41:40 PST)