Look at the cluster command.
On Mon, Apr 1, 2024, 5:54 AM Kankana Bhattacharjee via AMBER <
amber.ambermd.org> wrote:
> Dear AMBER users,
>
> I performed the MD simulation of a protein-ligand complex, now I would like
> to visualize the MD trajectory to understand the ligand binding pose etc. I
> want to collect representative snapshots from the MD trajectory.
> How can I achieve this job using cpptraj tool ? Kindly help me with this.
>
> Thanks & Regards
> Kankana Bhattacharjee
> Ph.D. Scholar
> Department of Chemistry
> Ashoka University
> Sonipat, Haryana
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Apr 01 2024 - 07:00:02 PDT
