[AMBER] Issue with glycam nomenclature

From: SUBHASMITA MAHAPATRA MAHAPATRA via AMBER <amber.ambermd.org>
Date: Fri, 22 Mar 2024 16:16:04 +0530

Hello,

I want to simulate this PDB:1FQ9. It has two chains of heparan sulfate
(E,F). They have this residue 'UAP' and I am unable to find its name as per
Glycam force field. I have tried the Glycam-web interface.

Kindly help me in this regard.

Thank you

-- 
*Yours Sincerely*
*Subhasmita Mahapatra*
*Ph.D. Scholar (PMRF)*
*Computational Biophysics Group*
*Department of Biosciences and Biomedical Engineering*
*Indian Institute of Technology, Indore*
*Madhya Pradesh, India (453552)*
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Received on Fri Mar 22 2024 - 04:00:02 PDT