Dear David
Thank you for your prompt response.. I will definitely try the suggested
solutions
Regards
On Mon, 6 Feb 2023 at 6:40 PM, David A Case <david.case.rutgers.edu> wrote:
> On Mon, Feb 06, 2023, Sumra Abbasi via AMBER wrote:
> >
> >While installing AMBER20 and AmberTools, I encountered the following
> >problem, When running the./run cmake command:
>
>
> >/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/download/Miniconda3-latest-Linux-x86_64.sh:
> >[[: not found
>
> Miniconda changes caused this problem, but they have been very slow about
> pushing out a fix. We have fixed this in the current AmberTools, but we
> have not back-ported the fix to earlier releases.
>
> Two avenues forward:
>
> 1. Download and install AmberTools22; you can still use pmemd from Amber20.
> Set your AMBERHOME variable to point to the AmberTools22 folder, since
> pmemd
> doesn't make use of that environment variable. This gets you the benefit
> of
> lots of other improvements in AmberTools22.
>
> 2. OR, get update.4 for AmberTools22 from the Amber web update page. It's
> a
> one-line change, and you can either use patch, or just manually edit the
> affected file. The re-run run_cmake in your AmberTools20/21 folder.
>
> ....dac
>
> --
Sumra Wajid Abbasi, PhD
Assistant Professor
Department of Biological Sciences
National University of Medical Sciences
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Received on Mon Feb 06 2023 - 06:00:03 PST
