[AMBER] Installation Error: miniconda issue

From: Sumra Abbasi via AMBER <amber.ambermd.org>
Date: Mon, 6 Feb 2023 10:13:34 +0500

Dear EXperts
Greetings

While installing AMBER20 and AmberTools, I encountered the following
problem, When running the./run cmake command:
Downloading and Extracting Packages
Preparing transaction: ...working... done
Executing transaction: ...working... done

Installing * environment...

/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/download/Miniconda3-latest-Linux-x86_64.sh:
440:
/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/download/Miniconda3-latest-Linux-x86_64.sh:
[[: not found
/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/download/Miniconda3-latest-Linux-x86_64.sh:
446:
/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/download/Miniconda3-latest-Linux-x86_64.sh:
[[: not found

CondaFileIOError:
'/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/install/pkgs/envs/*/env.txt'.
[Errno 2] No such file or directory:
'/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/install/pkgs/envs/*/env.txt'

CMake Error at cmake/UseMiniconda.cmake:146 (message):
  Miniconda installer failed! Please fix what's wrong, or disable Miniconda.
Call Stack (most recent call first):
  cmake/PythonInterpreterConfig.cmake:64 (download_and_use_miniconda)
  CMakeLists.txt:121 (include)
-- Configuring incomplete, errors occurred!
See also "/usr/AMBER-Files/amber20_src/build/CMakeFiles/CMakeOutput.log".
See also "/usr/AMBER-Files/amber20_src/build/CMakeFiles/CMakeError.log".

Although the required file "Miniconda3-latest-Linux-x86_64.sh" is present
in the desired folder
(root.drsumra-Z390-UD:/usr/AMBER-Files/amber20_src/build/CMakeFiles/miniconda/download#
)

Kindly guide me in this regard.

Thank You in Advance.

Best Regards

PS. I am herewith attaching the log file as well.


Sumra Wajid Abbasi, PhD
Assistant Professor
Department of Biological Sciences
National University of Medical Sciences


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Received on Sun Feb 05 2023 - 21:30:03 PST
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