Dear Amber Users
I have done dihedral PCA following one of the old posts in the forum (
http://archive.ambermd.org/201609/0359.html)
So finally I have a dat file containing 3 columns: Time Frame, Mode1, Mode 2
I want to get a visualisation of the clusters based on these dihedrals. I
have been looking at several tutorials on PCA clusters (specially the ones
that use the iris dataset) and was a little confused about my dataset. Does
anyone have any pointers on how to go about it with such a dataset
generated from cpptraj?
Thanks in advance
Suchetana
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Received on Mon Oct 17 2022 - 07:00:04 PDT
