Re: [AMBER] Force field interfaces

From: Maria Nagan via AMBER <amber.ambermd.org>
Date: Fri, 17 Jun 2022 09:37:28 -0400

I would look at the literature listed for each force field. You need a different force field for each biomolecules/type of entity in the simulation. Some go better with others. Look at each paper and the recommendations on the force field pages.

Maria

> On Jun 17, 2022, at 3:44 AM, Piia Bartos via AMBER <amber.ambermd.org> wrote:
>
> Hi,
>
> Amber deals with different molecules (protein, RNA, DNA, small molecules..) in different force fields. How are the interfaces between different force fields dealt with? Could you point me to some literature about this?
>
> Cheers,
> Piia Bartos
>
>
> --
> Piia BartoŇ°, Ph.D. (Pharmacy)
> Project Researcher
>
> University of Eastern Finland | UEF | School of Pharmacy
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Received on Thu Aug 04 2022 - 13:32:07 PDT
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