[AMBER] Problem in installation

From: Guodong <gwang86.outlook.com>
Date: Tue, 28 Dec 2021 20:28:23 +0800

Hi,

i met a problem in installation.

/usr/bin/ld: /usr/local/lib/libfftw3.a(assert.o): relocation
R_X86_64_PC32 against symbol `stdout@@GLIBC_2.2.5' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: final link failed: Bad value
collect2: error: ld returned 1 exit status
AmberTools/src/sander/CMakeFiles/libsander.dir/build.make:3282: recipe
for target 'AmberTools/src/sander/libsander.so' failed
make[2]: *** [AmberTools/src/sander/libsander.so] Error 1
CMakeFiles/Makefile2:3702: recipe for target
'AmberTools/src/sander/CMakeFiles/libsander.dir/all' failed
make[1]: *** [AmberTools/src/sander/CMakeFiles/libsander.dir/all] Error 2
Makefile:151: recipe for target 'all' failed
make: *** [all] Error 2
ubuntu.los:~/Downloads/amber20_src/build$ make disclean
make: *** No rule to make target 'disclean'.  Stop.
ubuntu.los:~/Downloads/amber20_src/build$
ubuntu.los:~/Downloads/amber20_src/build$ make distclean
make: *** No rule to make target 'distclean'.  Stop.
ubuntu.los:~/Downloads/amber20_src/build$ cd ..
ubuntu.los:~/Downloads/amber20_src$ make distclean
Makefile:4: config.h: No such file or directory
make: *** No rule to make target 'config.h'.  Stop.

Could you do me a favor?

Sincerely,

gd


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Dec 28 2021 - 04:30:02 PST
Custom Search