Re: [AMBER] open mpi compiler error

From: David A Case <>
Date: Tue, 30 Nov 2021 15:55:13 -0500

On Tue, Nov 30, 2021, Ayesha Fatima wrote:

>tar xvfj openmpi-4.1.2.tar.bz2
>You must download openmpi and extract it here
> (for example, type 'tar xvfj openmpi-1.8.tar.bz2')
>See for more info;

Look for the "mpidirs" variable in the configure_openmpi script, and change
it to something like this (from the current AmberTools release):

# Get the list of openmpi directories
mpidirs=`/bin/ls -d openmpi-[2-4].[0-9]*/ 2>/dev/null | tail -n 1`

You problem probably arises from the fact that you are using an old version
of the script, which was prepared before openmpi version 4 was released.


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Received on Tue Nov 30 2021 - 13:00:02 PST
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