[AMBER] Ligand breaks during system preparation

From: Ch Bilal <ch.bilal321.outlook.com>
Date: Sat, 6 Nov 2021 07:02:48 +0000

HI Amber Users,

I am performing system preparation of a protein-ligand complex (a protein of 1321aa) using AMBER20. The problem is that ligand gets broken during system preparation. I am attaching the system preparation commands here. Could you please help me to find out what is the problem?
Thank you,

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Received on Sat Nov 06 2021 - 00:30:02 PDT
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